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Smith, J., and A. Ogram. Genetic and functional variation in denitrifier populations along a short term restoration chronosequence in the Florida Everglades. Appl. Environ. Microbiol., submitted.

Jasrotia, P., and A. Ogram. 2008. Distribution of nifH genotypes in Everglades periphyton. Current Microbiol., accepted.

Uz, I., A. Chauhan, and A. Ogram. Cellulolytic, Fermentative, and Methanogenic Guilds in Benthic Periphyton Mats from the Florida Everglades. 2007. FEMS Microbiol. Ecol. 61:337–347.

Smith, J., H. Castro, and A. Ogram. Methanogenesis and Methanogens along a short term chronosequence in the Florida Everglades. 2007. Appl. Environ. Microbiol. 73: 4135-4141.

Corstanje, R., K. R. Reddy, J.P. Prenger, S. Newman and A.V. Ogram. 2007. Soil microbial eco-physiological response to nutrient enrichment in a sub-tropical wetland. Ecological Indicators 7: 277-289.

Ogram, A., H. Castro, and A. Chauhan. Analysis of soil microbial community structure. 2007. Manual of Environmental Microbiology, 3 rd Ed. Amer. Soc. Microbiol Press, Washington, D.C.

O gram, A., S. Bridgham, R. Corstanje, H. Drake, K. Küsel , A. Mills, S. Newman, K. Portier, R. Wetzel.2007.Linkages between Microbial Diversity and Biogeochemical Processes across Scales. In: (R. Bobbink, B. Beltman, JTA Verhoeven, and DF Whigham, Eds), Wetlands as a natural resource. Volume 2: Wetlands: functioning, biodiversity conservation and restoration. Springer Verlag.

Chauhan, A., and A. Ogram. 2006. Phylogeny of acetate utilizing microorganisms in soils along a nutrient gradient in the Florida Everglades. Appl. Environ. Microbiol. 72:6837-6840.

Chauhan, A., and A. Ogram. 2006. Fatty acid oxidizing guilds in the Florida Everglades. Appl. Environ.Microbiol., 72:2400-2406.

Chauhan, A., K.R. Reddy, and A.V. Ogram. 2006. Syntrophic-Archaeal associations in a nutrient-impacted freshwater marsh. J. Appl. Microbiol., 100:73-84.

Uz, I., and A. Ogram. 2006.Cellulolytic and fermentative guilds in the Florida Everglades. FEMS Microbiol.Ecol. 57:396-408.

Ogram, AV, H. Castro, E. Stanley, W. Chen, and J. Prenger. 2006. Distribution of methanotrophs in managed and highly degraded watersheds. Ecological Indicators 6:631-643.

Castro, H., S. Newman, K.R. Reddy, and A.V. Ogram. 2005. Distribution and stability of sulfate reducing prokaryotic and hydrogenotrophic methanogenic assemblages in nutrient-impacted regions of the Florida Everglades. Appl. Environ. Microbiol. 71:2695-2704.

Sharma, K., P. W. Inglett, K. R. Reddy, and A. V. Ogram.2005. Microscopic examination of photoautotrophic and phosphatase-producing bacteria in phosphorus-limited Everglades periphyton mats. Limnol. Oceanog. 50:2057-2062.

Chauhan, A., and A. Ogram. 2005. Evaluation of support matrices for immobilization of anaerobic consortia for efficient carbon cycling in waste regeneration. Biochem. Biophys. Res. Com. 327:884-93.

Ramakrishnan, V., A. Ogram, and A. Lindner. 2005. Impacts of co-solvent flushing on microbial populations capable of degrading trichloroethylene. Environmental Health Perspectives 113:55-61.

Castro, H., K. R. Reddy, and A.V. Ogram. 2004. Phylogenetic characterization of methanogenic assemblages in eutrophic and oligotrophic areas of the Florida Everglades. Appl. Environ. Microbiol. 70: 6559-6568.

Araujo, Q.R., N. B. Comerford, A.V. Ogram, A. Al-Agely, L. P. Santos Filho, J. G. Santos . 2004. Soil carbon and physical property changes in Brazilian Coastal Tableland soils with land use following deforestation.  Agroforestry Systems 63:193-198. 

ChauhanA., A.V. Ogram, and K.R. Reddy. 2004. Novel syntrophic-methanogenic associations along a nutrient gradient in the Florida Everglades. Appl. Environ. Microbiol. 70:3475-3484.

Ogram, A. 2004. Commentary on “A Role for Genetically Modified Microorganisms in Soil Carbon Sequestration,” by C. Rice and J.S. Angle. In: Applications of Biotechnology to Mitigation of Greenhouse Warming. Eds: N. Rosenberg, F. B. Metting, Jr., and R. C. Izaurralde. Battelle Press, Columbus, OH.

Uz, I., M. Rasche, A. Ogram, and A. Lindner.2003. Characterization of methanogenic and methanotrophic assemblages in landfill soils. Proc. Royal Soc. London (Suppl) Biol. Lett.

Duan, Y.P., H. Castro, T. Hewlett, J. White, and A. Ogram. 2003. Phylogeny and detection of Pastueria species. Int. J. Evol. System. Microbiol. 53: 105-112.

Castro, H., K.R. Reddy, and A. Ogram. 2002. Composition and function of sulfate-reducing prokaryotes in eutrophic and pristine areas of the Everglades. Appl. Environ. Microbiol. 68:6129-6137.

Ogram, A. 2002. Characterization of contaminated sites by molecular diagnostics. In: Environmental Biotechnology (Geetha Bali, ed). APH Publishing Corporation, New Delhi.

Castro, H., and A. Ogram. 2002. Soil genetic ecology. Encyclopedia of Environmental Microbiology, (ed.) G. Bitton, Wiley, NY.

Ou, L.T., J. Thomas, K. Chung, and A. Ogram. 2001. Degradation of 1,3-dichloropropene by a soil bacterial consortium and Rhodococcus sp. AS2C isolated from the consortium. Biodegradation 12: 39-47.

Ogram, A., and K. Sharma. 2001. Analysis of soil microbial community structure. Manual of Environmental Microbiology, 2 nd Ed. Amer. Soc. Microbiol Press.

Trabue, S.L., A.V. Ogram, and L.-T. Ou. 2000. Dynamics of carbofuran-degrading microbial communities in soil during three successive annual applications of carbofuran. Soil Biology & Biochemistry. 33:75-81.

Ogram, A.V. 2000. Soil molecular ecology at age 20: Methodological challenges for the future. Soil Biology & Biochemistry 32:1499-1504.

Ogram, A.V., Y.P-Duan, S. Trabue, X. Feng, H. Castro, L. Ou. 2000. Comparison of plasmids mediating metabolism of carbofuran. FEMS Microbiology Ecology 32:197-203.

Uz, I., Y.P. Duan, and A. Ogram. 2000. Characterization of the novel naphthalene-metabolizing bacterium, Rhodococcus opacus M213, FEMS Microbiology Lett. 185:231-238.

Castro, H.F., N. Williams, and A.V. Ogram. 2000. Phylogeny of sulfate reducing bacteria. FEMS Microbiology Ecology 31:1-9.